Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
ABC0802 | ABC1904 | Sulfatase; Belongs to the LTA synthase family. | Conserved hypothetical protein. | 0.420 |
ABC0802 | ABC2526 | Sulfatase; Belongs to the LTA synthase family. | Competence protein/transcription factor. | 0.517 |
ABC0802 | ABC2666 | Sulfatase; Belongs to the LTA synthase family. | Conserved hypothetical protein. | 0.650 |
ABC0802 | ABC2741 | Sulfatase; Belongs to the LTA synthase family. | Adenine-specific methyltransferase. | 0.665 |
ABC0802 | ABC3217 | Sulfatase; Belongs to the LTA synthase family. | Phosphoglycerol transferase; Belongs to the LTA synthase family. | 0.905 |
ABC0802 | ABC3293 | Sulfatase; Belongs to the LTA synthase family. | Phosphoglycerol transferase; Belongs to the LTA synthase family. | 0.908 |
ABC0880 | ABC1088 | CAAX amino terminal protease family protease. | Conserved hypothetical protein. | 0.461 |
ABC0880 | ABC2526 | CAAX amino terminal protease family protease. | Competence protein/transcription factor. | 0.569 |
ABC0880 | ABC2666 | CAAX amino terminal protease family protease. | Conserved hypothetical protein. | 0.524 |
ABC0880 | ABC2741 | CAAX amino terminal protease family protease. | Adenine-specific methyltransferase. | 0.673 |
ABC1088 | ABC0880 | Conserved hypothetical protein. | CAAX amino terminal protease family protease. | 0.461 |
ABC1088 | ABC1904 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.578 |
ABC1088 | ABC2526 | Conserved hypothetical protein. | Competence protein/transcription factor. | 0.594 |
ABC1088 | ABC2666 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.682 |
ABC1088 | ABC2741 | Conserved hypothetical protein. | Adenine-specific methyltransferase. | 0.724 |
ABC1756 | ABC2666 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.607 |
ABC1756 | ABC2741 | Conserved hypothetical protein. | Adenine-specific methyltransferase. | 0.532 |
ABC1904 | ABC0802 | Conserved hypothetical protein. | Sulfatase; Belongs to the LTA synthase family. | 0.420 |
ABC1904 | ABC1088 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.578 |
ABC1904 | ABC2526 | Conserved hypothetical protein. | Competence protein/transcription factor. | 0.673 |
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