STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC2672TetR/AcrR family transcriptional regulator. (195 aa)    
Predicted Functional Partners:
ABC2671
enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
  
 0.863
etfB
Electron transfer flavoprotein beta subunit.
 
  
 0.752
etfA
Electron transfer flavoprotein alpha subunit.
 
  
 0.668
lcfA
long-chain-fatty-acid--CoA ligase.
 
  
 0.628
ABC3892
Fe-S oxidoreductase.
 
  
 0.622
ABC3187
TetR family transcriptional regulator.
  
     0.568
ABC2990
3-hydroxyacyl-CoA dehydrogenase.
 
  
 0.507
ABC2674
Conserved hypothetical protein.
 
     0.466
ABC1423
TetR family transcriptional regulator.
  
     0.464
acuA
Acetoin utilization protein AcuA; Part of the acuABC operon, which is possibly involved in the breakdown of acetoin and butanediol. Acts as an acetyltransferase inactivating acetyl-CoA synthetase AcsA via acetylation at a Lys residue.
  
    0.453
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.