STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC2690Antimicrobial peptide ABC transporter permease. (397 aa)    
Predicted Functional Partners:
ABC2691
Antimicrobial peptide ABC transporter ATP-binding protein.
 
 0.999
ABC0259
Antimicrobial peptide ABC transporter ATP-binding protein.
 
 0.986
ABC2692
Conserved hypothetical protein.
 
 
 0.976
ABC0943
Antimicrobial peptide ABC transporter ATP-binding protein.
 
 0.972
ABC3495
Antimicrobial peptide ABC transporter ATP-binding protein.
 
 0.955
ABC3229
Antimicrobial peptide ABC transporter ATP-binding protein.
 
 0.920
ABC0252
Antimicrobial peptide ABC transporter ATP-binding protein.
 
 0.896
ABC0707
Antimicrobial peptide ABC transporter ATP-binding protein.
 
     0.896
ftsE
Cell-division ATP-binding protein; Part of the ABC transporter FtsEX involved in cellular division.
   
 0.818
ABC0028
Glutamine ABC transporter ATP-binding protein.
 
      0.785
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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