STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC2691Antimicrobial peptide ABC transporter ATP-binding protein. (224 aa)    
Predicted Functional Partners:
ABC2690
Antimicrobial peptide ABC transporter permease.
 
 0.999
ABC0258
Antimicrobial peptide ABC transporter permease.
  
 
 0.959
ABC2692
Conserved hypothetical protein.
 
 
 0.934
ABC2693
Hypothetical protein.
  
    0.810
ABC0708
Antimicrobial peptide ABC transporter permease.
 
 
 0.587
ABC0944
Antimicrobial peptide ABC transporter permease.
  
 
 0.552
ABC2288
arginyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
 
     0.499
ABC3230
Antimicrobial peptide ABC transporter permease.
  
 
 0.497
ABC0253
Antimicrobial peptide ABC transporter permease.
  
 
 0.492
ABC3494
Antimicrobial peptide ABC transporter permease.
  
 
 0.492
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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