STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC2738Hypothetical protein. (263 aa)    
Predicted Functional Partners:
ABC2739
CMP-binding protein.
 
     0.828
copZ
Copper chaperon.
  
 
 0.746
ABC2163
Conserved hypothetical protein.
  
     0.730
ABC3859
Conserved hypothetical protein.
  
     0.699
ABC2726
Conserved hypothetical protein.
  
     0.631
ABC0203
Conserved hypothetical protein.
 
   
 0.627
ABC2566
Intracellular proteinase inhibitor.
 
     0.605
ABC0592
Conserved hypothetical protein.
  
     0.600
ABC3024
Glutaredoxin.
 
 
 
 0.599
ackA
Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
  
  
 0.569
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.