STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC2743Antibiotic resistance protein. (398 aa)    
Predicted Functional Partners:
ABC1479
DMT superfamily drug/metabolite transporter; Belongs to the major facilitator superfamily.
  
   
 0.503
tpx
Thiol peroxidase; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Tpx subfamily.
       0.493
ABC1787
Efflux transporter multidrug resistance protein; Belongs to the major facilitator superfamily.
  
   
 0.480
ABC0420
Efflux transporter multidrug resistance protein; Belongs to the major facilitator superfamily.
  
   
 0.463
lmrB
Lincomycin-resistance protein; Belongs to the major facilitator superfamily.
  
   
 0.449
ABC1392
Major facilitator (MFS) superfamily protein.
  
   
 0.414
mdr
Major facilitator (MFS) superfamily multidrug resistance protein.
  
  
 0.408
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.