STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC2744Conserved hypothetical protein. (140 aa)    
Predicted Functional Partners:
ABC2745
Conserved hypothetical protein.
 
    0.943
ABC2376
Conserved hypothetical protein.
  
    0.756
spoIIIAC
Stage III sporulation protein AC.
  
     0.756
ABC2953
Conserved hypothetical protein.
  
   
 0.756
spoIIR
Stage II sporulation protein R.
  
     0.739
ABC2349
Conserved hypothetical protein.
  
  
 0.735
spoIIID
Stage III sporulation protein D.
  
  
 0.734
tepA
Translocation-enhancing protein TepA.
  
    0.728
spoIIIAE
Stage III sporulation protein AE.
  
     0.719
ABC1675
Stage IV sporulation protein.
  
     0.716
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.