STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC2753Transcriptional regulator. (211 aa)    
Predicted Functional Partners:
erzA
Negative regulator of FtsZ ring formation.
 
   
 0.797
ftsZ
Cell division initiation protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
    
 
 0.665
ABC2383
Conserved hypothetical protein.
  
     0.450
bofA
Inhibition of the pro-sigma-K processing machinery.
  
     0.446
spoIVFA
Stage IV sporulation protein FA.
  
     0.424
ABC2626
Stage VI sporulation protein D.
  
     0.412
ABC2756
GAF domain-containing protein; Probable gene remnant. Similar to the region between codons 156 and 205 of Bacillus anthracis transposase, IS605 family BA3745 (370 aa) TR:Q81Y14; locus_tag:ABC2754.
       0.411
ABC2384
Conserved hypothetical protein.
  
     0.405
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.