STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC2777Conserved hypothetical protein. (100 aa)    
Predicted Functional Partners:
ABC2741
Adenine-specific methyltransferase.
  
     0.653
ABC1567
Hypothetical protein.
  
     0.647
ABC1845
Conserved hypothetical protein.
  
     0.638
ABC1528
Conserved hypothetical protein.
  
     0.589
ABC2162
Conserved hypothetical protein.
  
    0.573
ABC2780
Phosphotransferase.
 
    0.568
ABC2775
Conserved hypothetical protein.
       0.539
ABC2776
Endo-1,4-beta-glucanase.
       0.511
cinA
Competence/damage-inducible protein CinA; Belongs to the CinA family.
  
     0.502
ABC1438
Conserved hypothetical protein.
  
     0.497
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.