STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC2840Terminase small subunit G1p. (145 aa)    
Predicted Functional Partners:
ABC2839
Terminase large subunit G2p.
 
  
 0.973
ABC2837
Hypothetical protein.
  
  
 0.808
ABC2838
Hypothetical protein.
       0.795
ABC2834
Structural protein.
 
  
 0.722
ABC2841
Hypothetical protein.
       0.625
ABC2835
Hypothetical protein.
       0.541
ABC2836
Hypothetical protein.
       0.541
ABC2829
Hypothetical protein.
  
  
 0.505
ABC0983
Hypothetical protein.
  
    0.438
ABC0924
Phage-related protein.
  
    0.433
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.