STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC2874S-adenosylmethionine (SAM)-dependent methyltransferase. (194 aa)    
Predicted Functional Partners:
mraZ
Conserved hypothetical protein; Belongs to the MraZ family.
  
  
 0.787
ABC2875
Carbonic anhydrase.
       0.735
truA
Pseudouridylate synthase I; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
  
 
 0.688
ABC2595
Deaminating glycine/D-amino acid oxidases.
 
    0.674
nifZ
Cysteine desulfurase.
  
  
 0.654
ABC1597
caffeoyl-CoA O-methyltransferase.
  
  
 0.643
ABC0532
glycine/D-amino acid oxidase.
 
    0.621
ABC2873
Major facilitator (MFS) superfamily multidrug resistance protein.
  
    0.610
ABC2363
Cell division initiation protein FtsL.
  
  
 0.546
pheT
phenylalanyl-tRNA synthetase beta chain; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
  
  
 0.513
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.