Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
ABC1465 | ABC2880 | Conserved hypothetical protein. | Peptidase. | 0.570 |
ABC1465 | ABC3885 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.643 |
ABC1581 | ABC2880 | Dinucleotide-utilizing enzyme. | Peptidase. | 0.570 |
ABC1706 | ABC2880 | Conserved hypothetical protein; Belongs to the 5'(3')-deoxyribonucleotidase family. | Peptidase. | 0.552 |
ABC1706 | ABC3885 | Conserved hypothetical protein; Belongs to the 5'(3')-deoxyribonucleotidase family. | Conserved hypothetical protein. | 0.525 |
ABC1946 | ABC2298 | Conserved hypothetical protein. | Conserved hypothetical protein; Belongs to the UPF0435 family. | 0.716 |
ABC1946 | ABC2880 | Conserved hypothetical protein. | Peptidase. | 0.493 |
ABC2298 | ABC1946 | Conserved hypothetical protein; Belongs to the UPF0435 family. | Conserved hypothetical protein. | 0.716 |
ABC2298 | ABC2880 | Conserved hypothetical protein; Belongs to the UPF0435 family. | Peptidase. | 0.493 |
ABC2686 | ABC2880 | Conserved hypothetical protein. | Peptidase. | 0.529 |
ABC2880 | ABC1465 | Peptidase. | Conserved hypothetical protein. | 0.570 |
ABC2880 | ABC1581 | Peptidase. | Dinucleotide-utilizing enzyme. | 0.570 |
ABC2880 | ABC1706 | Peptidase. | Conserved hypothetical protein; Belongs to the 5'(3')-deoxyribonucleotidase family. | 0.552 |
ABC2880 | ABC1946 | Peptidase. | Conserved hypothetical protein. | 0.493 |
ABC2880 | ABC2298 | Peptidase. | Conserved hypothetical protein; Belongs to the UPF0435 family. | 0.493 |
ABC2880 | ABC2686 | Peptidase. | Conserved hypothetical protein. | 0.529 |
ABC2880 | ABC2881 | Peptidase. | Nitrate/sulfonate/taurine/bicarbonate ABC transporter substrate-binding protein. | 0.601 |
ABC2880 | ABC2882 | Peptidase. | Nitrate/sulfonate/taurine/bicarbonate ABC transporter ATP-binding protein. | 0.586 |
ABC2880 | ABC2883 | Peptidase. | Nitrate/sulfonate/taurine/bicarbonate ABC transporter permease. | 0.586 |
ABC2880 | ABC3885 | Peptidase. | Conserved hypothetical protein. | 0.659 |
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