STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC2908NADH-dependent butanol dehydrogenase. (387 aa)    
Predicted Functional Partners:
guaA
GMP synthetase; Catalyzes the synthesis of GMP from XMP.
  
    0.852
ABC2439
Nucleoside-diphosphate-sugar epimerase.
  
  
 0.697
ABC0750
Oxidoreductase; Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily.
  
  
 0.635
ddlA
D-alanine--D-alanine ligase A; Cell wall formation.
       0.598
ABC3788
NADH-dependent flavin oxidoreductase.
  
  
 0.593
ABC3530
Hypothetical protein.
   
    0.565
ABC2909
Conserved hypothetical protein.
       0.560
pgi
Glucose-6-phosphate isomerase A.
  
    0.517
ABC3824
Conserved hypothetical protein.
   
  
 0.505
ABC1303
Cell-division inhibitor.
   
    0.499
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.