Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
ABC2929BC component PTS system mannitol-permease II. (568 aa)    
Predicted Functional Partners:
mtlD
Mannitol-1-phosphate 5-dehydrogenase.
 
 
 0.999
ABC2927
A component PTS system mannitol-permease II.
 
 0.999
mtlR
BglG family transcriptional antiterminator.
 
  
 0.983
ptsH
PTS system histidine-containing phosphocarrier protein HPr.
   
 0.933
ABC0883
Conserved hypothetical protein.
 
  
 0.833
licR
Transcriptional antiterminator of lichenan operon.
 
  
 0.783
ABC3501
Conserved hypothetical protein.
 
  
 0.772
uxaB
Altronate oxidoreductase.
  
  
 0.760
ABC1154
Altronate oxidoreductase.
  
  
 0.760
ABC3348
Transcriptional antiterminator.
 
  
 0.738
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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