STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC2931Amino acid ABC transporter permease. (221 aa)    
Predicted Functional Partners:
ABC2930
Amino acid ABC transporter substrate-binding protein.
 0.998
ABC0026
Glutamine ABC transporter substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family.
 
 0.986
ABC0028
Glutamine ABC transporter ATP-binding protein.
 
 0.943
glnQ
Glutamine ABC transporter ATP-binding protein.
 
 0.943
ABC0913
Amino acid ABC transporter ATP-binding protein.
 
 0.941
glnH
Glutamine ABC transporter substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family.
 
 0.934
cysK
Cysteine synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
  
  
 0.638
ABC1944
Cysteine synthase.
  
  
 0.638
ABC2792
Cysteine synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
  
  
 0.638
ABC0910
Amino acid ABC transporter substrate-binding protein.
 
 
 0.567
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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