STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC2946Conserved hypothetical protein. (150 aa)    
Predicted Functional Partners:
ABC2945
4-nitrophenylphosphatase.
     
 0.924
ABC2948
Conserved hypothetical protein.
 
  
 0.850
ABC1967
Hypothetical protein; Mediates bacterial resistance to the antibiotics streptomycin and spectomycin.
   
 
 0.797
ABC1305
Conserved hypothetical protein.
  
     0.767
ABC2947
Conserved hypothetical protein.
 
     0.757
sdhC
Succinate dehydrogenase cytochrome b558 subunit.
  
     0.753
ABC2204
Conserved hypothetical protein.
  
     0.750
cccB
Cytochrome c551.
  
     0.743
acuA
Acetoin utilization protein AcuA; Part of the acuABC operon, which is possibly involved in the breakdown of acetoin and butanediol. Acts as an acetyltransferase inactivating acetyl-CoA synthetase AcsA via acetylation at a Lys residue.
  
     0.739
ABC2159
Conserved hypothetical protein.
  
     0.729
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.