Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABC1613 | acoC | ABC1613 | ABC2784 | Lipoate-protein ligase. | Acetoin dehydrogenase E2 component. | 0.755 |
ABC1613 | bkdB | ABC1613 | ABC2449 | Lipoate-protein ligase. | Branched-chain alpha-keto acid dehydrogenase E2 component. | 0.729 |
ABC1613 | gcvH | ABC1613 | ABC2986 | Lipoate-protein ligase. | Glycine cleavage system H protein; Is also involved in protein lipoylation via its role as an octanoyl/lipoyl carrier protein intermediate; Belongs to the GcvH family. | 0.875 |
ABC1613 | lipL | ABC1613 | ABC3909 | Lipoate-protein ligase. | Lipoate-protein ligase; Catalyzes the amidotransfer (transamidation) of the octanoyl moiety from octanoyl-GcvH to the lipoyl domain of the E2 subunit of lipoate-dependent enzymes; Belongs to the octanoyltransferase LipL family. | 0.938 |
ABC1613 | lipS | ABC1613 | ABC2950 | Lipoate-protein ligase. | Lipoic acid synthetase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives. | 0.986 |
ABC1613 | lpd | ABC1613 | ABC2452 | Lipoate-protein ligase. | Branched-chain alpha-keto acid dehydrogenase E3 component. | 0.822 |
ABC1613 | odhB | ABC1613 | ABC2113 | Lipoate-protein ligase. | 2-oxoglutarate dehydrogenase E2 component; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2). | 0.672 |
ABC2951 | lipS | ABC2951 | ABC2950 | Metalloendopeptidase. | Lipoic acid synthetase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives. | 0.583 |
acoC | ABC1613 | ABC2784 | ABC1613 | Acetoin dehydrogenase E2 component. | Lipoate-protein ligase. | 0.755 |
acoC | gcvH | ABC2784 | ABC2986 | Acetoin dehydrogenase E2 component. | Glycine cleavage system H protein; Is also involved in protein lipoylation via its role as an octanoyl/lipoyl carrier protein intermediate; Belongs to the GcvH family. | 0.568 |
acoC | lipL | ABC2784 | ABC3909 | Acetoin dehydrogenase E2 component. | Lipoate-protein ligase; Catalyzes the amidotransfer (transamidation) of the octanoyl moiety from octanoyl-GcvH to the lipoyl domain of the E2 subunit of lipoate-dependent enzymes; Belongs to the octanoyltransferase LipL family. | 0.476 |
acoC | lipM | ABC2784 | ABC2491 | Acetoin dehydrogenase E2 component. | Lipoate-protein ligase; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domain of GcvH, an intermediate carrier during protein lipoylation. | 0.502 |
acoC | lipS | ABC2784 | ABC2950 | Acetoin dehydrogenase E2 component. | Lipoic acid synthetase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives. | 0.531 |
acoC | lpd | ABC2784 | ABC2452 | Acetoin dehydrogenase E2 component. | Branched-chain alpha-keto acid dehydrogenase E3 component. | 0.993 |
bkdB | ABC1613 | ABC2449 | ABC1613 | Branched-chain alpha-keto acid dehydrogenase E2 component. | Lipoate-protein ligase. | 0.729 |
bkdB | gcvH | ABC2449 | ABC2986 | Branched-chain alpha-keto acid dehydrogenase E2 component. | Glycine cleavage system H protein; Is also involved in protein lipoylation via its role as an octanoyl/lipoyl carrier protein intermediate; Belongs to the GcvH family. | 0.568 |
bkdB | lipL | ABC2449 | ABC3909 | Branched-chain alpha-keto acid dehydrogenase E2 component. | Lipoate-protein ligase; Catalyzes the amidotransfer (transamidation) of the octanoyl moiety from octanoyl-GcvH to the lipoyl domain of the E2 subunit of lipoate-dependent enzymes; Belongs to the octanoyltransferase LipL family. | 0.580 |
bkdB | lipM | ABC2449 | ABC2491 | Branched-chain alpha-keto acid dehydrogenase E2 component. | Lipoate-protein ligase; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domain of GcvH, an intermediate carrier during protein lipoylation. | 0.502 |
bkdB | lipS | ABC2449 | ABC2950 | Branched-chain alpha-keto acid dehydrogenase E2 component. | Lipoic acid synthetase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives. | 0.487 |
bkdB | lpd | ABC2449 | ABC2452 | Branched-chain alpha-keto acid dehydrogenase E2 component. | Branched-chain alpha-keto acid dehydrogenase E3 component. | 0.999 |
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