STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC2953Conserved hypothetical protein. (255 aa)    
Predicted Functional Partners:
ABC2744
Conserved hypothetical protein.
  
   
 0.756
spoIIE
Serine phosphatase stage II sporulation protein E.
  
     0.726
spoIIP
Stage II sporulation protein P; Septal wall dissolution protein.
  
     0.725
ABC2376
Conserved hypothetical protein.
  
     0.721
gpr
Germination protease precursor; Initiates the rapid degradation of small, acid-soluble proteins during spore germination; Belongs to the peptidase A25 family.
  
     0.720
ABC1675
Stage IV sporulation protein.
  
     0.711
spoIIIAC
Stage III sporulation protein AC.
 
     0.705
spoIVA
Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat.
  
     0.692
ABC1827
Stage V sporulation protein AE.
  
     0.681
spoIVB
Stage IV sporulation protein B.
  
   
 0.681
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.