STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC2971Hypothetical protein; Belongs to the glycosyl hydrolase 1 family. (79 aa)    
Predicted Functional Partners:
bglP
A component PTS system glucose-specific enzyme II.
 
  
 0.884
ABC2972
BglG family transcriptional antiterminator.
 
  
 0.879
licT
BglG family transcriptional antiterminator.
 
  
 0.772
ABC3336
BglG family transcriptional antiterminator.
 
  
 0.759
glcT
BglG family transcriptional antiterminator.
 
  
 0.691
ABC1453
BC component PTS system sucrose-specific enzyme II.
 
  
 0.629
ABC3764
BC component PTS system trehalose-specific enzyme II.
 
  
 0.611
ABC0640
B component PTS system cellobiose-specific enzyme II.
 
  
 0.573
ABC0481
B component PTS system cellobiose-specific enzyme II.
 
  
 0.561
ABC3666
B component PTS system diacetylchitobiose-specific enzyme II.
 
  
 0.554
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.