STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC2992ABC transporter substrate-binding protein. (659 aa)    
Predicted Functional Partners:
ABC2991
Major facilitator (MFS) superfamily protein.
 
    0.782
ABC1219
Oligopeptide ABC transporter substrate-binding protein.
  
     0.654
ABC4066
Oligopeptide ABC transporter substrate-binding protein.
  
     0.581
ABC1051
Conserved hypothetical protein.
  
     0.508
ABC1242
Oligopeptide ABC transporter permease.
  
     0.492
ABC1241
Oligopeptide ABC transporter permease.
  
     0.472
ABC0566
Oligopeptide ABC transporter permease.
  
     0.448
ABC2648
Hypothetical protein.
  
     0.447
ABC0565
Oligopeptide ABC transporter permease.
  
     0.446
ABC0232
Dipeptide/oligopeptide/nickel ABC transporter permease.
  
     0.413
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.