STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC3012Conserved hypothetical protein. (324 aa)    
Predicted Functional Partners:
ABC3010
Conserved hypothetical protein.
  
 0.951
ABC0217
Conserved hypothetical protein.
  
 0.846
ABC0468
Conserved hypothetical protein.
  
 0.846
ABC0625
Conserved hypothetical protein.
  
 0.846
ABC1015
Conserved hypothetical protein.
  
 0.846
ABC3604
Conserved hypothetical protein.
  
 0.846
ABC3011
Hypothetical protein.
 
     0.810
ABC3013
Muconate cycloisomerase; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
  
    0.727
ABC3014
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
    0.723
ABC3015
Dihydrodipicolinate synthase; Belongs to the DapA family.
       0.722
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.