sigL protein (Bacillus clausii) - STRING interaction network

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Known Interactions

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Predicted Interactions

gene neighborhood

gene fusions

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textmining

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protein homology

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[Homology]

Score

sigL

DNA-directed RNA polymerase sigma-54 factor sigma-L. (445 aa)

Predicted Functional Partners:

levR

0.973

rpoA

0.915

rpoB

0.876

rpoC

0.875

rpoZ

0.865

rocR

0.816

ABC0326

0.811

ABC0045

0.807

ABC0453

0.802

ABC0964

0.802

Your Current Organism:

Bacillus clausii

NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ABC0045	sigL	ABC0045	ABC3025	Transcriptional regulator.	DNA-directed RNA polymerase sigma-54 factor sigma-L.	0.807
ABC0326	sigL	ABC0326	ABC3025	Transcriptional regulator.	DNA-directed RNA polymerase sigma-54 factor sigma-L.	0.811
ABC0453	sigL	ABC0453	ABC3025	Transcriptional regulator.	DNA-directed RNA polymerase sigma-54 factor sigma-L.	0.802
ABC0964	sigL	ABC0964	ABC3025	Transcriptional regulator.	DNA-directed RNA polymerase sigma-54 factor sigma-L.	0.802
levR	rpoA	ABC4075	ABC0177	Transcriptional activator of the levanase operon.	DNA-directed RNA polymerase alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.535
levR	rpoB	ABC4075	ABC0142	Transcriptional activator of the levanase operon.	DNA-directed RNA polymerase beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.535
levR	rpoC	ABC4075	ABC0143	Transcriptional activator of the levanase operon.	DNA-directed RNA polymerase beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.535
levR	rpoZ	ABC4075	ABC2321	Transcriptional activator of the levanase operon.	DNA-directed RNA polymerase omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.535
levR	sigL	ABC4075	ABC3025	Transcriptional activator of the levanase operon.	DNA-directed RNA polymerase sigma-54 factor sigma-L.	0.973
rocR	sigL	ABC0016	ABC3025	Transcriptional activator of arginine utilization operon.	DNA-directed RNA polymerase sigma-54 factor sigma-L.	0.816
rpoA	levR	ABC0177	ABC4075	DNA-directed RNA polymerase alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Transcriptional activator of the levanase operon.	0.535
rpoA	rpoB	ABC0177	ABC0142	DNA-directed RNA polymerase alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoA	rpoC	ABC0177	ABC0143	DNA-directed RNA polymerase alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoA	rpoZ	ABC0177	ABC2321	DNA-directed RNA polymerase alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.998
rpoA	sigL	ABC0177	ABC3025	DNA-directed RNA polymerase alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase sigma-54 factor sigma-L.	0.915
rpoB	levR	ABC0142	ABC4075	DNA-directed RNA polymerase beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Transcriptional activator of the levanase operon.	0.535
rpoB	rpoA	ABC0142	ABC0177	DNA-directed RNA polymerase beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoB	rpoC	ABC0142	ABC0143	DNA-directed RNA polymerase beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoB	rpoZ	ABC0142	ABC2321	DNA-directed RNA polymerase beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.997
rpoB	sigL	ABC0142	ABC3025	DNA-directed RNA polymerase beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase sigma-54 factor sigma-L.	0.876