STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cypCFatty acid alpha hydroxylase; Cytochrome P450. (417 aa)    
Predicted Functional Partners:
ABC0251
Macrolide glycosyltransferase.
  
 
 0.745
ABC2105
5'-3' exonuclease.
    
 0.698
polA
DNA-directed DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
    
 0.698
ABC1186
Manganese catalase.
  
    0.640
ABC2408
Conserved hypothetical protein.
   
 0.618
ABC0526
Conserved hypothetical protein.
  
     0.614
ABC2101
Conserved hypothetical protein.
  
    0.601
ABC1424
Conserved hypothetical protein.
 
 
 0.598
ABC2896
Conserved hypothetical protein.
 
 0.561
ABC0008
Oxidoreductase.
  
 
 0.533
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.