Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABC0088 | ABC0132 | ABC0088 | ABC0132 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.542 |
ABC0088 | ABC3061 | ABC0088 | ABC3061 | Conserved hypothetical protein. | Serine protease. | 0.637 |
ABC0088 | minC | ABC0088 | ABC2611 | Conserved hypothetical protein. | Septum site-determining protein MinC; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization; Belongs to the MinC family. | 0.475 |
ABC0132 | ABC0088 | ABC0132 | ABC0088 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.542 |
ABC0132 | ABC3061 | ABC0132 | ABC3061 | Conserved hypothetical protein. | Serine protease. | 0.710 |
ABC0132 | ftsX | ABC0132 | ABC3064 | Conserved hypothetical protein. | Cell-division protein FtsX; Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation. Belongs to the ABC-4 integral membrane protein family. FtsX subfamily. | 0.416 |
ABC1567 | ABC1845 | ABC1567 | ABC1845 | Hypothetical protein. | Conserved hypothetical protein. | 0.483 |
ABC1567 | ABC3061 | ABC1567 | ABC3061 | Hypothetical protein. | Serine protease. | 0.595 |
ABC1845 | ABC1567 | ABC1845 | ABC1567 | Conserved hypothetical protein. | Hypothetical protein. | 0.483 |
ABC1845 | ABC3061 | ABC1845 | ABC3061 | Conserved hypothetical protein. | Serine protease. | 0.596 |
ABC3061 | ABC0088 | ABC3061 | ABC0088 | Serine protease. | Conserved hypothetical protein. | 0.637 |
ABC3061 | ABC0132 | ABC3061 | ABC0132 | Serine protease. | Conserved hypothetical protein. | 0.710 |
ABC3061 | ABC1567 | ABC3061 | ABC1567 | Serine protease. | Hypothetical protein. | 0.595 |
ABC3061 | ABC1845 | ABC3061 | ABC1845 | Serine protease. | Conserved hypothetical protein. | 0.596 |
ABC3061 | ABC3062 | ABC3061 | ABC3062 | Serine protease. | Carboxyl-terminal processing protease; Belongs to the peptidase S41A family. | 0.630 |
ABC3061 | ABC3063 | ABC3061 | ABC3063 | Serine protease. | Metalloendopeptidase. | 0.595 |
ABC3061 | ftsE | ABC3061 | ABC3065 | Serine protease. | Cell-division ATP-binding protein; Part of the ABC transporter FtsEX involved in cellular division. | 0.639 |
ABC3061 | ftsX | ABC3061 | ABC3064 | Serine protease. | Cell-division protein FtsX; Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation. Belongs to the ABC-4 integral membrane protein family. FtsX subfamily. | 0.618 |
ABC3061 | minC | ABC3061 | ABC2611 | Serine protease. | Septum site-determining protein MinC; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization; Belongs to the MinC family. | 0.773 |
ABC3061 | minD | ABC3061 | ABC2610 | Serine protease. | Septum site-determining protein MinD. | 0.652 |
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