STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC3062Carboxyl-terminal processing protease; Belongs to the peptidase S41A family. (484 aa)    
Predicted Functional Partners:
ABC1904
Conserved hypothetical protein.
  
 
 0.781
ABC1726
Conserved hypothetical protein.
  
 
 0.754
ABC3063
Metalloendopeptidase.
 
 
 
 0.744
ABC3061
Serine protease.
  
  
 0.723
ftsX
Cell-division protein FtsX; Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation. Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
 
     0.706
ftsE
Cell-division ATP-binding protein; Part of the ABC transporter FtsEX involved in cellular division.
       0.645
ABC0474
Beta 1,4 glucosyltransferase.
  
 
 0.640
ABC3818
Conserved hypothetical protein.
  
 
 0.598
ABC1138
Conserved hypothetical protein.
 
 
 0.570
ABC0333
Conserved hypothetical protein.
  
 
 0.512
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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