STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC3063Metalloendopeptidase. (457 aa)    
Predicted Functional Partners:
ftsX
Cell-division protein FtsX; Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation. Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
 
  
 0.952
ftsE
Cell-division ATP-binding protein; Part of the ABC transporter FtsEX involved in cellular division.
 
  
 0.950
ABC0068
Conserved hypothetical protein.
 
  
 0.884
ABC1928
Peptidoglycan-binding domain-containing protein.
  
 0.854
ABC1929
Peptidoglycan-binding domain-containing protein.
  
 0.846
ABC0489
Cell wall-binding protein; Probable gene remnant. Similar to the C-terminal region of transcriptional regulator fragment.
  
 0.811
spoIIQ
Stage II sporulation protein Q.
  
     0.739
lytE
Cell wall lytic activity endopeptidase.
 
  
 0.718
ABC1938
Cell wall lytic activity.
 
  
 0.700
ABC3988
Conserved hypothetical protein.
 
  
 0.692
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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