comFC protein (Bacillus clausii) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

comFC

Late competence protein ComFC. (234 aa)

Predicted Functional Partners:

comFA

0.926

comEC

0.848

ABC2279

0.845

ABC3085

0.736

radC

0.732

flgK

0.714

tyrA

0.710

ABC2264

0.686

nagA

0.680

hemY

0.661

Your Current Organism:

Bacillus clausii

NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ABC2264	ABC2279	ABC2264	ABC2279	Hypothetical protein.	Smf family DNA processing protein.	0.503
ABC2264	comFC	ABC2264	ABC3083	Hypothetical protein.	Late competence protein ComFC.	0.686
ABC2264	flgK	ABC2264	ABC3079	Hypothetical protein.	Flagellar hook-associated protein 1 FlgK; Belongs to the flagella basal body rod proteins family.	0.818
ABC2279	ABC2264	ABC2279	ABC2264	Smf family DNA processing protein.	Hypothetical protein.	0.503
ABC2279	comEC	ABC2279	ABC1648	Smf family DNA processing protein.	Late competence protein ComEC.	0.830
ABC2279	comFA	ABC2279	ABC3084	Smf family DNA processing protein.	Late competence protein ComFA.	0.504
ABC2279	comFC	ABC2279	ABC3083	Smf family DNA processing protein.	Late competence protein ComFC.	0.845
ABC2279	flgK	ABC2279	ABC3079	Smf family DNA processing protein.	Flagellar hook-associated protein 1 FlgK; Belongs to the flagella basal body rod proteins family.	0.428
ABC2279	radC	ABC2279	ABC2615	Smf family DNA processing protein.	DNA repair protein RadC; Belongs to the UPF0758 family.	0.598
ABC3085	comFA	ABC3085	ABC3084	Conserved hypothetical protein.	Late competence protein ComFA.	0.699
ABC3085	comFC	ABC3085	ABC3083	Conserved hypothetical protein.	Late competence protein ComFC.	0.736
ABC3085	flgK	ABC3085	ABC3079	Conserved hypothetical protein.	Flagellar hook-associated protein 1 FlgK; Belongs to the flagella basal body rod proteins family.	0.501
comEC	ABC2279	ABC1648	ABC2279	Late competence protein ComEC.	Smf family DNA processing protein.	0.830
comEC	comFA	ABC1648	ABC3084	Late competence protein ComEC.	Late competence protein ComFA.	0.892
comEC	comFC	ABC1648	ABC3083	Late competence protein ComEC.	Late competence protein ComFC.	0.848
comEC	radC	ABC1648	ABC2615	Late competence protein ComEC.	DNA repair protein RadC; Belongs to the UPF0758 family.	0.541
comFA	ABC2279	ABC3084	ABC2279	Late competence protein ComFA.	Smf family DNA processing protein.	0.504
comFA	ABC3085	ABC3084	ABC3085	Late competence protein ComFA.	Conserved hypothetical protein.	0.699
comFA	comEC	ABC3084	ABC1648	Late competence protein ComFA.	Late competence protein ComEC.	0.892
comFA	comFC	ABC3084	ABC3083	Late competence protein ComFA.	Late competence protein ComFC.	0.926