STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
degUTwo-component response regulator of extracellular degradative enzyme. (235 aa)    
Predicted Functional Partners:
degS
Two-component sensor histidine kinase of extracellular degradative enzyme; Member of the two-component regulatory system DegS/DegU, which plays an important role in the transition growth phase.
 
 0.993
ABC3141
Two-component sensor histidine kinase.
 
 
 0.873
ABC3333
Two-component sensor histidine kinase.
 
 
 0.860
ABC1044
Two-component sensor histidine kinase.
 
 
 0.852
desK
Two-component sensor histidine kinase.
 
 
 0.838
ABC3375
Two-component sensor histidine kinase.
 
 
 0.837
nreB
Two-component sensor histidine kinase of nitrate reduction.
 
 
 0.833
ABC2124
Two-component sensor histidine kinase.
 
 
 0.819
ABC1432
Two-component sensor histidine kinase.
 
 
 0.771
ABC3085
Conserved hypothetical protein.
       0.683
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.