STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC3097beta-N-acetylglucosaminidase. (1398 aa)    
Predicted Functional Partners:
engB
GTP-binding protein; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family.
  
    0.801
ABC1938
Cell wall lytic activity.
  
  
 0.528
lytE
Cell wall lytic activity endopeptidase.
  
  
 0.528
ABC3988
Conserved hypothetical protein.
  
  
 0.528
prkC
Serine/threonine protein kinase.
  
  
 0.503
ABC3096
LytR family transcriptional antiterminator.
       0.499
cwlC
N-acetylmuramoyl-L-alanine amidase.
 
 
 0.480
ABC3063
Metalloendopeptidase.
  
  
 0.478
pbpC
Penicillin-binding protein 3.
 
  
 0.460
ABC1726
Conserved hypothetical protein.
  
   0.427
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.