STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC3125Sugar ABC transporter substrate-binding protein. (447 aa)    
Predicted Functional Partners:
ABC3123
Sugar ABC transporter permease.
 
  0.977
ABC3118
Sugar ABC transporter permease.
 
  0.959
ABC3124
Sugar ABC transporter permease.
 
   0.813
ABC3122
Sugar ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
  
 
 0.784
ABC3126
beta-N-acetylhexosaminidase.
 
   
 0.713
ABC3121
Hypothetical protein.
       0.630
ABC3585
Sugar ABC transporter substrate-binding protein.
  
     0.575
ABC3774
Sugar ABC transporter substrate-binding protein.
  
     0.571
ABC1213
Sugar ABC transporter substrate-binding protein.
  
     0.544
ABC0728
Polysaccharide ABC transporter permease.
 
   0.529
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.