STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC3130Conserved hypothetical protein. (273 aa)    
Predicted Functional Partners:
ABC3133
Multidrug ABC transporter ATP-binding protein.
 
     0.941
ABC3132
GntR family transcriptional regulator.
 
     0.869
ABC3134
Conserved hypothetical protein.
 
    
0.804
ABC3131
Hypothetical protein.
       0.781
ABC3129
Hypothetical protein.
       0.773
ABC3135
Hypothetical protein.
       0.728
ABC3128
Hypothetical protein.
       0.573
ABC0279
GNAT family acetyltransferase; Probable gene remnant. Similar to the C-terminal region of Bacillus subtilis YdfD protein SW:P96681 (482 aa); locus_tag:ABC0277.
  
     0.461
ABC0937
Conserved hypothetical protein.
  
     0.448
ABC0515
Hypothetical protein.
  
     0.400
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.