Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
adaBmethylated-DNA-[protein]-cysteine S-methyltransferase. (177 aa)    
Predicted Functional Partners:
adaA
methylphosphotriester-DNA alkyltransferase.
  
 0.996
alkA
DNA-3-methyladenine glycosylase II.
  
  
 0.801
ABC1466
Conserved hypothetical protein.
      0.554
ABC3200
Conserved hypothetical protein.
  
  
 0.501
ABC1936
3-methyladenine DNA glycosylase; Belongs to the DNA glycosylase MPG family.
     
 0.496
glmS
Glucosamine--fructose-6-phosphate aminotransferase [isomerizing]; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
     
 0.414
ABC1469
Conserved hypothetical protein.
       0.411
dinG
ATP-dependent DNA helicase DinG; 3'-5' exonuclease.
     
 0.407
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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