Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABC3162Hypothetical protein. (59 aa)    
Predicted Functional Partners:
ABC3163
Oxidoreductase.
  
    0.576
gsiB
General stress protein B.
   
  
 0.515
ABC3308
Conserved hypothetical protein.
  
  
 0.509
tagH
Teichoic acid ABC transporter ATP-binding protein; Part of the ABC transporter complex TagGH involved in teichoic acids export. Responsible for energy coupling to the transport system.
  
    0.502
ABC3956
General stress protein 17M.
  
  
 0.502
ohrB
Organic hydroperoxide resistance protein.
  
  
 0.489
ABC2118
Conserved hypothetical protein.
  
  
 0.489
tagG
Teichoic acid ABC transporter permease.
  
    0.476
ABC2562
Conserved hypothetical protein.
   
    0.456
dps
General stress protein 20U Dps; Belongs to the Dps family.
  
  
 0.430
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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