STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC3184Conserved hypothetical protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (249 aa)    
Predicted Functional Partners:
ABC3186
Multidrug ABC transporter permease.
 
  
 0.940
natA
Multidrug ABC transporter ATP-binding protein.
 
  
 0.914
ABC0258
Antimicrobial peptide ABC transporter permease.
  
  
 0.770
ABC0909
Conserved hypothetical protein.
  
 
 0.765
ABC3071
Hypothetical protein.
  
 
 0.765
ABC3490
Conserved hypothetical protein.
  
 
 0.765
ABC2690
Antimicrobial peptide ABC transporter permease.
 
  
 0.748
ABC3187
TetR family transcriptional regulator.
 
   
 0.727
ABC3230
Antimicrobial peptide ABC transporter permease.
  
  
 0.690
ABC2692
Conserved hypothetical protein.
 
   
 0.523
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.