STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC3188Conserved hypothetical protein. (184 aa)    
Predicted Functional Partners:
ABC3189
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
 
     0.692
dps
General stress protein 20U Dps; Belongs to the Dps family.
  
  
 0.572
ABC1553
Forespore regulator of the sigma-K checkpoint.
  
     0.472
ABC3252
Response regulator aspartate phosphatase.
  
     0.450
ABC2326
Conserved hypothetical protein.
  
     0.438
ABC3625
Response regulator aspartate phosphatase.
  
     0.438
prkA
Serine protein kinase.
   
    0.434
ABC0905
Conserved hypothetical protein.
  
     0.418
ABC2118
Conserved hypothetical protein.
 
  
 0.412
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.