STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC3206Spermidine/putrescine ABC transporter permease. (273 aa)    
Predicted Functional Partners:
ABC3204
Spermidine/putrescine ABC transporter substrate-binding protein.
 
 
 0.999
ABC3207
Spermidine/putrescine ABC transporter permease.
0.999
ABC3208
Spermidine/putrescine ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.998
ABC3649
Fe3+ ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 0.965
ABC3262
Fe3+ ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 0.951
ABC3205
Inosine-uridine preferring nucleoside hydrolase.
       0.711
cysA
Sulfate ABC transporter ATP-binding protein; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system.
 
     0.617
murB
UDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation.
  
  
 0.593
ABC0341
Glycerol-3-phosphate ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
   
 0.585
ade2
Adenine deaminase; Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family.
 
     0.579
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.