Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ABC3208Spermidine/putrescine ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily. (351 aa)    
Predicted Functional Partners:
ABC3206
Spermidine/putrescine ABC transporter permease.
 
 0.998
ABC3207
Spermidine/putrescine ABC transporter permease.
 
 0.998
ABC3204
Spermidine/putrescine ABC transporter substrate-binding protein.
 
 0.993
ABC3648
Fe3+ ABC transporter permease.
 
 
 0.795
ABC3260
Fe3+ ABC transporter permease.
 
 
 0.740
ade2
Adenine deaminase; Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family.
 
    0.664
ABC3650
Fe3+ ABC transporter substrate-binding protein.
 
  
 0.551
ABC3373
Molybdenum ABC transporter permease; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
   
 0.529
ABC3261
Fe3+ ABC transporter substrate-binding protein.
 
  
 0.506
ABC1461
Multidrug ABC transporter ATP-binding protein.
  
     0.504
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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