Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
ABC0254 | ABC3228 | Two-component response regulator. | Two-component sensor histidine kinase. | 0.832 |
ABC1169 | ABC3228 | Two-component response regulator. | Two-component sensor histidine kinase. | 0.820 |
ABC1177 | ABC3228 | Two-component response regulator. | Two-component sensor histidine kinase. | 0.808 |
ABC1859 | ABC3228 | Two-component response regulator. | Two-component sensor histidine kinase. | 0.801 |
ABC3227 | ABC3228 | Two-component response regulator. | Two-component sensor histidine kinase. | 0.972 |
ABC3227 | ABC3229 | Two-component response regulator. | Antimicrobial peptide ABC transporter ATP-binding protein. | 0.702 |
ABC3227 | ABC3230 | Two-component response regulator. | Antimicrobial peptide ABC transporter permease. | 0.851 |
ABC3228 | ABC0254 | Two-component sensor histidine kinase. | Two-component response regulator. | 0.832 |
ABC3228 | ABC1169 | Two-component sensor histidine kinase. | Two-component response regulator. | 0.820 |
ABC3228 | ABC1177 | Two-component sensor histidine kinase. | Two-component response regulator. | 0.808 |
ABC3228 | ABC1859 | Two-component sensor histidine kinase. | Two-component response regulator. | 0.801 |
ABC3228 | ABC3227 | Two-component sensor histidine kinase. | Two-component response regulator. | 0.972 |
ABC3228 | ABC3229 | Two-component sensor histidine kinase. | Antimicrobial peptide ABC transporter ATP-binding protein. | 0.796 |
ABC3228 | ABC3230 | Two-component sensor histidine kinase. | Antimicrobial peptide ABC transporter permease. | 0.902 |
ABC3228 | ABC3553 | Two-component sensor histidine kinase. | Two-component response regulator. | 0.817 |
ABC3228 | ABC3641 | Two-component sensor histidine kinase. | Two-component response regulator. | 0.801 |
ABC3228 | ABC4010 | Two-component sensor histidine kinase. | Two-component response regulator. | 0.805 |
ABC3229 | ABC3227 | Antimicrobial peptide ABC transporter ATP-binding protein. | Two-component response regulator. | 0.702 |
ABC3229 | ABC3228 | Antimicrobial peptide ABC transporter ATP-binding protein. | Two-component sensor histidine kinase. | 0.796 |
ABC3229 | ABC3230 | Antimicrobial peptide ABC transporter ATP-binding protein. | Antimicrobial peptide ABC transporter permease. | 0.969 |
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