Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ABC3229Antimicrobial peptide ABC transporter ATP-binding protein. (259 aa)    
Predicted Functional Partners:
ABC3230
Antimicrobial peptide ABC transporter permease.
 
 
 0.972
ABC3228
Two-component sensor histidine kinase.
 
 
 0.965
ABC3494
Antimicrobial peptide ABC transporter permease.
 
 
 0.945
ABC0258
Antimicrobial peptide ABC transporter permease.
  
 
 0.935
ABC2690
Antimicrobial peptide ABC transporter permease.
 
 0.916
ABC0253
Antimicrobial peptide ABC transporter permease.
 
 
 0.837
ABC0255
Two-component sensor histidine kinase.
 
 
 0.836
ABC3227
Two-component response regulator.
 
   
 0.741
ABC0708
Antimicrobial peptide ABC transporter permease.
 
 
 0.561
ABC1461
Multidrug ABC transporter ATP-binding protein.
 
     0.537
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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