STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC3233Transcriptional regulator. (312 aa)    
Predicted Functional Partners:
ABC3238
NAD(P)-dependent oxidoreductase.
 
     0.863
ABC3237
Conserved hypothetical protein.
 
     0.822
ABC3236
C2 component PTS system glucitol/sorbitol-specific enzyme II.
 
     0.815
ABC3235
BC component PTS system glucitol/sorbitol-specific enzyme II.
 
     0.809
ABC3234
A component PTS system glucitol/sorbitol-specific enzyme II.
 
     0.798
dra
Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.
 
   
 0.707
pdp
Pyrimidine-nucleoside phosphorylase.
 
   
 0.662
ABC0287
Nucleoside transporter; Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family.
     
 0.635
ABC2368
2-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid.
      
 0.599
ABC3610
Dihydroxyacetone kinase.
     0.591
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.