STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC3238NAD(P)-dependent oxidoreductase. (418 aa)    
Predicted Functional Partners:
ABC3237
Conserved hypothetical protein.
 
    0.951
ABC3236
C2 component PTS system glucitol/sorbitol-specific enzyme II.
 
    0.941
ABC3235
BC component PTS system glucitol/sorbitol-specific enzyme II.
 
    0.926
ABC3234
A component PTS system glucitol/sorbitol-specific enzyme II.
 
    0.917
ABC3233
Transcriptional regulator.
 
     0.863
ABC1159
PTS system glucitol-specific enzyme III.
 
    0.754
ABC1157
C2 component PTS system glucitol/sorbitol-specific enzyme II.
 
    0.731
ABC1158
BC component PTS system glucitol/sorbitol-specific enzyme II.
 
    0.728
deoR
Transcriptional regulator of sorbose uptake and utilization genes.
 
     0.549
ABC1156
Sorbitol operon activator.
 
    0.533
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.