STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC3282Sugar ABC transporter substrate-binding protein. (434 aa)    
Predicted Functional Partners:
ABC3281
Sugar ABC transporter permease.
 
 0.969
ABC3280
Sugar ABC transporter permease.
 
   
 0.937
ABC3518
Sugar ABC transporter permease.
 
 
 0.858
ABC3775
Sugar ABC transporter permease.
 
 0.845
ABC0317
Sugar ABC transporter permease.
 
 0.842
ABC4028
Maltose ABC transporter permease.
  
 
 0.838
ABC1214
Sugar ABC transporter permease.
 
 0.837
ABC3441
Sugar ABC transporter permease.
 
 0.822
ABC0353
Glycerol-3-phosphate ABC transporter permease.
 
 0.821
ABC0395
Lactose ABC transporter permease.
 
 0.805
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.