STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC3309Conserved hypothetical protein. (182 aa)    
Predicted Functional Partners:
ABC2408
Conserved hypothetical protein.
 
     0.630
ABC3308
Conserved hypothetical protein.
 
     0.564
gsiB
General stress protein B.
  
     0.551
ABC0271
Conserved hypothetical protein.
 
     0.525
ABC3461
Anti-anti-sigma regulatory factor.
 
     0.501
ABC2529
Conserved hypothetical protein.
  
     0.488
ABC3490
Conserved hypothetical protein.
  
     0.453
ABC1496
Conserved hypothetical protein.
 
    0.449
ABC2880
Peptidase.
  
     0.444
ABC2116
Hypothetical protein.
  
     0.436
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.