STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hutUUrocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate. (559 aa)    
Predicted Functional Partners:
hutI
Imidazolonepropionase; Belongs to the metallo-dependent hydrolases superfamily. HutI family.
 
 
 0.999
hutH
Histidine ammonia-lyase; Belongs to the PAL/histidase family.
 
 0.999
ABC3327
Conserved hypothetical protein.
  
  
 0.834
ABC3326
Conserved hypothetical protein.
       0.787
ABC3328
N-carbamoyl-L-amino acid hydrolase.
       0.785
ABC0371
Formiminoglutamase; Belongs to the arginase family.
 
  
 0.769
ABC0562
Conserved hypothetical protein.
  
  
 0.711
ABC0563
Conserved hypothetical protein.
  
  
 0.711
ABC2598
Conserved hypothetical protein.
  
  
 0.711
ABC3331
AraC/XylS family transcriptional regulator.
       0.538
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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