STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC3364Pyrophosphatase. (107 aa)    
Predicted Functional Partners:
ABC2900
Conserved hypothetical protein.
  
     0.622
ABC1172
Multidrug ABC transporter permease.
  
     0.557
ABC3639
Bacitracin ABC transporter permease.
  
     0.527
tagH
Teichoic acid ABC transporter ATP-binding protein; Part of the ABC transporter complex TagGH involved in teichoic acids export. Responsible for energy coupling to the transport system.
  
    0.517
ABC3674
Conserved hypothetical protein.
  
   
 0.512
ABC1051
Conserved hypothetical protein.
  
     0.489
tagG
Teichoic acid ABC transporter permease.
       0.481
ABC0570
Conserved hypothetical protein.
  
     0.474
ABC1937
Lysine decarboxylase; Belongs to the LOG family.
 
    0.462
ABC3673
Conserved hypothetical protein.
  
    0.447
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
Server load: medium (52%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.