STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC3385Short-chain alcohol dehydrogenase. (303 aa)    
Predicted Functional Partners:
ABC3386
Transcriptional regulator.
 
     0.858
ABC1384
Translation initiation inhibitor.
  
    0.624
ABC1418
Uncharacterized protein; Probable gene remnant. Similar to the N-terminal region of Amycolatopsis orientalis hypothetical protein CZA382.14c (202 aa) TR:Q9XBD7; locus_tag:ABC1416.
  
     0.597
ABC0369
AraC/XylS family transcriptional regulator.
  
     0.548
ABC3387
Superoxide dismutase [Cu-Zn]; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family.
 
   0.507
ABC1387
Epoxide hydrolase 1.
 
  0.491
cypA
Cytochrome P450.
  
 
 0.471
ABC3777
MarR family transcriptional regulator.
  
     0.459
ABC1420
Hypothetical protein.
  
     0.456
ABC0370
Conserved hypothetical protein.
  
   0.447
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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