STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
czcDCation (Co/Zn/Cd) efflux transporter. (307 aa)    
Predicted Functional Partners:
ABC3390
ArsR family transcriptional regulator.
     
 0.801
ABC1930
Cation (Co/Zn/Cd) efflux transporter; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.
 
 
 0.566
ABC0983
Hypothetical protein.
   
    0.548
trkA
Trk family potassium transport system protein.
  
    0.534
gltC
LysR family transcriptional activator of glutamate synthase; Belongs to the LysR transcriptional regulatory family.
     
 0.482
copZ
Copper chaperon.
 
   
 0.467
ABC3231
Copper-transporting ATPase.
 
  
 0.442
cotA
Spore coat protein.
 
  
 0.441
ABC0224
Copper-transporting ATPase.
 
  
 0.431
ABC2408
Conserved hypothetical protein.
  
 0.429
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.