STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC3390ArsR family transcriptional regulator. (101 aa)    
Predicted Functional Partners:
arsR
ArsR family transcriptional regulator.
 
  
 0.847
czcD
Cation (Co/Zn/Cd) efflux transporter.
     
 0.845
ABC0835
ArsR family transcriptional regulator.
 
  
 0.833
ABC2444
Conserved hypothetical protein.
 
   
 0.682
ABC3349
Cation-transporting ATPase.
 
  
 0.571
ABC0269
Cadmium-transporting ATPase.
 
  
 0.567
gltC
LysR family transcriptional activator of glutamate synthase; Belongs to the LysR transcriptional regulatory family.
  
  
 0.503
ABC0224
Copper-transporting ATPase.
  
  
 0.449
ABC3231
Copper-transporting ATPase.
  
  
 0.449
folD
Bifunctional protein FolD; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.
       0.422
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.