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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC3399NADH-dependent FMN reductase. (181 aa)    
Predicted Functional Partners:
ABC3395
Alkanesulfonate monooxygenase.
 
 
 0.990
ssuD
Alkanesulfonate monooxygenase; Catalyzes the desulfonation of aliphatic sulfonates. Belongs to the SsuD family.
 
 
 0.979
ABC3394
Nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein.
 
 
  0.946
ABC3398
Nitrilotriacetate monooxygenase component A.
 
  
 0.924
ABC0597
FMN reductase.
 
  
0.920
ABC3393
Nitrate/sulfonate/bicarbonate ABC transporter permease.
 
 
  0.920
ssuB2
Nitrate/sulfonate/bicarbonate ABC transporter ATP-binding protein; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system.
 
 
  0.920
ABC0765
Thiosulfate sulfurtransferase.
 
  
  0.918
ribC
Riboflavin biosynthesis protein RibC; FMN adenylyltransferase; Belongs to the ribF family.
    
  0.904
cysH
Phosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily.
   
 
  0.902
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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