STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABC3400LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (299 aa)    
Predicted Functional Partners:
ABC0940
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.773
ABC1803
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.757
ABC3397
Hypothetical protein.
       0.552
ABC3399
NADH-dependent FMN reductase.
       0.528
gltA
Glutamate synthase large subunit.
     
 0.509
ABC3398
Nitrilotriacetate monooxygenase component A.
  
    0.484
ABC3401
Conserved hypothetical protein.
       0.473
ABC3395
Alkanesulfonate monooxygenase.
  
    0.444
ssuB2
Nitrate/sulfonate/bicarbonate ABC transporter ATP-binding protein; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system.
       0.427
ABC3394
Nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein.
       0.409
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.