STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC3400LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (299 aa)    
Predicted Functional Partners:
ABC0940
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.773
ABC1803
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.757
ABC3399
NADH-dependent FMN reductase.
       0.528
ABC3397
Hypothetical protein.
       0.508
gltA
Glutamate synthase large subunit.
  
  
 0.488
ABC3398
Nitrilotriacetate monooxygenase component A.
  
    0.483
ABC3401
Conserved hypothetical protein.
       0.473
ABC3395
Alkanesulfonate monooxygenase.
  
    0.444
ssuB2
Nitrate/sulfonate/bicarbonate ABC transporter ATP-binding protein; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system.
     
 0.430
ABC3394
Nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein.
     
 0.416
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.